User Guide
registry upload
registry download
registry list
get_conference_topics
get_topic_evolution
search_papers
get_cluster_visualization
API Reference
DatabaseError
EmbeddingModelConflictError
EmbeddingModelConflictError.__init__()
normalize_model_name()
DatabaseManager
DatabaseManager.__init__()
DatabaseManager.connect()
DatabaseManager.close()
DatabaseManager.__enter__()
DatabaseManager.__exit__()
DatabaseManager.compute_uid()
DatabaseManager.create_tables()
DatabaseManager.add_paper()
DatabaseManager.add_papers()
DatabaseManager.donate_validation_data()
DatabaseManager.donate_chat_transcript()
DatabaseManager.get_chat_donations()
DatabaseManager.get_chat_donation_stats()
DatabaseManager.get_validation_data()
DatabaseManager.get_validation_data_stats()
DatabaseManager.delete_chat_donations()
DatabaseManager.delete_validation_data()
DatabaseManager.query()
DatabaseManager.get_paper_count()
DatabaseManager.get_paper_by_uid()
DatabaseManager.get_paper_by_original_id_or_uid()
DatabaseManager.SEARCHABLE_FIELDS
DatabaseManager.FIELD_ALIASES
DatabaseManager.search_papers()
DatabaseManager.parse_field_filters()
DatabaseManager.search_papers_keyword()
DatabaseManager.get_stats()
DatabaseManager.get_author_count()
DatabaseManager.get_years_for_conference()
DatabaseManager.get_conference_years_from_db()
DatabaseManager.resolve_default_conference_year()
DatabaseManager.resolve_conference_name()
DatabaseManager.resolve_conference_for_url()
DatabaseManager.get_sessions()
DatabaseManager.get_conferences()
DatabaseManager.get_years()
DatabaseManager.get_embedding_model()
DatabaseManager.set_embedding_model()
DatabaseManager.get_clustering_cache()
DatabaseManager.save_clustering_cache()
DatabaseManager.delete_papers_by_conference_year()
DatabaseManager.delete_clustering_cache_by_conference_year()
DatabaseManager.count_clustering_cache_by_conference_year()
DatabaseManager.clear_clustering_cache()
DatabaseManager.update_clustering_cache_embedding_model()
DatabaseManager.get_hierarchical_label_cache()
DatabaseManager.save_hierarchical_label_cache()
DatabaseManager.add_eval_qa_pair()
DatabaseManager.get_eval_qa_pairs()
DatabaseManager.get_eval_qa_pair_count()
DatabaseManager.update_eval_qa_pair()
DatabaseManager.delete_eval_qa_pair()
DatabaseManager.delete_verified_eval_qa_pairs()
DatabaseManager.delete_eval_results()
DatabaseManager.add_eval_result()
DatabaseManager.get_eval_results()
DatabaseManager.get_eval_run_ids()
DatabaseManager.get_eval_run_summary()
DatabaseManager.export_papers_to_sqlite()
DatabaseManager.import_papers_from_sqlite()
DatabaseManager.export_clustering_cache_to_json()
DatabaseManager.import_clustering_cache_from_json()
RateLimitedTransport
RateLimitedTransport.__init__()
RateLimitedTransport.handle_request()
RateLimitedTransport.close()
AsyncRateLimitedTransport
AsyncRateLimitedTransport.__init__()
AsyncRateLimitedTransport.handle_async_request()
AsyncRateLimitedTransport.aclose()
EmbeddingsError
EmbeddingsManager
EmbeddingsManager.__init__()
EmbeddingsManager.client
EmbeddingsManager.collection
EmbeddingsManager.openai_client
EmbeddingsManager.connect()
EmbeddingsManager.close()
EmbeddingsManager.__enter__()
EmbeddingsManager.__exit__()
EmbeddingsManager.test_lm_studio_connection()
EmbeddingsManager.generate_embedding()
EmbeddingsManager.create_collection()
EmbeddingsManager.paper_exists()
EmbeddingsManager.paper_needs_update()
EmbeddingsManager.embedding_text_from_paper()
EmbeddingsManager.parse_chromadb_metadata()
EmbeddingsManager.add_paper()
EmbeddingsManager.search_similar()
EmbeddingsManager.get_collection_stats()
EmbeddingsManager.check_model_compatibility()
EmbeddingsManager.embed_from_database()
EmbeddingsManager.search_papers_semantic()
EmbeddingsManager.count_papers_within_distance()
EmbeddingsManager.find_papers_within_distance()
EmbeddingsManager.delete_embeddings_by_filter()
EmbeddingsManager.export_embeddings()
EmbeddingsManager.import_embeddings()
EmbeddingsManager.update_paper_metadata()
ClusteringError
calculate_default_clusters()
ClusteringManager
ClusteringManager.__init__()
ClusteringManager.load_embeddings()
ClusteringManager.reduce_dimensions()
ClusteringManager.cluster()
ClusteringManager.get_hierarchy_level_clusters()
ClusteringManager.generate_hierarchical_labels()
ClusteringManager.get_cluster_statistics()
ClusteringManager.extract_cluster_keywords()
ClusteringManager.generate_cluster_labels()
ClusteringManager.get_cluster_representative_papers()
ClusteringManager.get_clustering_results()
ClusteringManager.export_to_json()
perform_clustering()
compute_clusters_with_cache()
RAGError
RAGDeps
RAGDeps.tool_results
RAGDeps.conferences
RAGDeps.years
RAGDeps.__init__()
RAGChat
RAGChat.__init__()
RAGChat.query()
RAGChat.chat()
RAGChat.reset_conversation()
RAGChat.conversation_history
RAGChat.export_conversation()
load_env_file()
Config
Config.__init__()
Config.get_supported_env_vars()
Config.to_dict()
Config.__repr__()
get_config()
DownloaderPlugin
DownloaderPlugin.plugin_name
DownloaderPlugin.plugin_description
DownloaderPlugin.supported_years
DownloaderPlugin.get_url()
DownloaderPlugin.download()
DownloaderPlugin.get_metadata()
DownloaderPlugin.validate_year()
LightweightDownloaderPlugin
LightweightDownloaderPlugin.plugin_name
LightweightDownloaderPlugin.plugin_description
PluginRegistry
PluginRegistry.__init__()
PluginRegistry.register()
PluginRegistry.unregister()
PluginRegistry.get()
PluginRegistry.list_plugins()
PluginRegistry.list_plugin_names()
register_plugin()
get_plugin()
list_plugins()
list_plugin_names()
convert_to_lightweight_schema()
LightweightPaper
LightweightPaper.title
LightweightPaper.authors
LightweightPaper.abstract
LightweightPaper.session
LightweightPaper.poster_position
LightweightPaper.year
LightweightPaper.conference
LightweightPaper.original_id
LightweightPaper.paper_pdf_url
LightweightPaper.poster_image_url
LightweightPaper.url
LightweightPaper.room_name
LightweightPaper.keywords
LightweightPaper.starttime
LightweightPaper.endtime
LightweightPaper.award
LightweightPaper.validate_title()
LightweightPaper.validate_authors()
LightweightPaper.validate_abstract()
LightweightPaper.validate_session()
LightweightPaper.validate_conference()
LightweightPaper.validate_year()
LightweightPaper.model_config
sanitize_author_names()
validate_lightweight_paper()
validate_lightweight_papers()
RegistryError
EmbeddingModelMismatchError
EmbeddingModelMismatchError.__init__()
RegistryClient
RegistryClient.__init__()
RegistryClient.list_tags()
RegistryClient.clear_local_embedding_data()
RegistryClient.upload()
RegistryClient.download()
RegistryClient.upload_all()
RegistryClient.download_all()
RegistryClient.get_artifact_info()
RegistryClient.delete_old_versions()
ClusterAnalysisError
load_clustering_data()
analyze_cluster_topics()
get_conference_topics()
merge_where_clause_with_conference()
merge_where_clause_with_years()
get_topic_evolution()
search_papers()
get_paper_details()
analyze_topic_relevance()
get_cluster_visualization()
run_mcp_server()
MCPToolsError
execute_mcp_tool()
get_mcp_tools_schema()
format_tool_result_for_llm()
natural_sort_key()
fetch_conference_info()
get_poster_url()
generate_all_papers_markdown()
generate_search_term_markdown()
generate_main_readme()
generate_folder_structure_export()
export_papers_to_zip()
PaperFormattingError
format_search_results()
build_context_from_papers()
extract_top_keywords()
Base
Base.__init__()
Paper
Paper.uid
Paper.original_id
Paper.title
Paper.authors
Paper.abstract
Paper.session
Paper.poster_position
Paper.paper_pdf_url
Paper.poster_image_url
Paper.url
Paper.room_name
Paper.keywords
Paper.starttime
Paper.endtime
Paper.award
Paper.year
Paper.conference
Paper.created_at
Paper.__repr__()
Paper.__init__()
EmbeddingsMetadata
EmbeddingsMetadata.id
EmbeddingsMetadata.embedding_model
EmbeddingsMetadata.created_at
EmbeddingsMetadata.updated_at
EmbeddingsMetadata.__repr__()
EmbeddingsMetadata.__init__()
ClusteringCache
ClusteringCache.id
ClusteringCache.embedding_model
ClusteringCache.conference
ClusteringCache.year
ClusteringCache.reduction_method
ClusteringCache.n_components
ClusteringCache.clustering_method
ClusteringCache.n_clusters
ClusteringCache.clustering_params
ClusteringCache.results_json
ClusteringCache.created_at
ClusteringCache.__repr__()
ClusteringCache.__init__()
HierarchicalLabelCache
HierarchicalLabelCache.id
HierarchicalLabelCache.embedding_model
HierarchicalLabelCache.linkage
HierarchicalLabelCache.labels_json
HierarchicalLabelCache.created_at
HierarchicalLabelCache.__repr__()
HierarchicalLabelCache.__init__()
ValidationData
ValidationData.id
ValidationData.paper_uid
ValidationData.priority
ValidationData.search_term
ValidationData.donated_at
ValidationData.__repr__()
ValidationData.__init__()
ChatDonation
ChatDonation.id
ChatDonation.rating
ChatDonation.transcript
ChatDonation.donated_at
ChatDonation.__repr__()
ChatDonation.__init__()
EvalQAPair
EvalQAPair.id
EvalQAPair.conversation_id
EvalQAPair.turn_number
EvalQAPair.query
EvalQAPair.expected_answer
EvalQAPair.tool_name
EvalQAPair.verified
EvalQAPair.source_info
EvalQAPair.created_at
EvalQAPair.updated_at
EvalQAPair.__repr__()
EvalQAPair.__init__()
EvalResult
EvalResult.id
EvalResult.run_id
EvalResult.qa_pair_id
EvalResult.actual_answer
EvalResult.actual_tool_name
EvalResult.answer_score
EvalResult.tool_correct
EvalResult.latency_ms
EvalResult.error
EvalResult.judge_reasoning
EvalResult.created_at
EvalResult.__repr__()
EvalResult.__init__()
EvaluationError
format_eval_summary()
format_eval_result_detail()
Evaluator
Evaluator.__init__()
Evaluator.openai_client
Evaluator.generate_qa_pairs()
Evaluator.store_qa_pairs()
Evaluator.run_evaluation()
Evaluator.format_run_summary()
Development
main
develop
abstracts_explorer
abstracts_explorer.clustering
abstracts_explorer.config
abstracts_explorer.database
abstracts_explorer.db_models
abstracts_explorer.embeddings
abstracts_explorer.evaluation
abstracts_explorer.export_utils
abstracts_explorer.mcp_server
abstracts_explorer.mcp_tools
abstracts_explorer.paper_utils
abstracts_explorer.plugin
abstracts_explorer.rag
abstracts_explorer.registry
